Meeting Agendas 2015/2016
Weekly Timetable
| Mon | Tue | Wed | Thurday | Friday | ||
|---|---|---|---|---|---|---|
| AM | Dojo Code (CM, CC) | |||||
| PM | Workflow analyse séquences Metagénomique Microbienne (Gse, SSB) |
Agilathon including Galaxy (AD) |
RNA-seq (Gsa, MS) | |||
| GBSpipelinethon (MS, GSa) | ||||||
| Reseq (GD, SEG) | ||||||
South Green members
AGAP, IRD, C2B users
C2B users
Thursday Meeting / Workshop Planning
| Date | Type | Room | Bat | Time | Comment |
|---|---|---|---|---|---|
| 03-sept | Agilathon | Café | 3 | 14h00 |
Réunion Agilathon |
| 10-sept | ID1 | 137 | 2 | 14h30 | Réunion équipe ID |
| 17-sept | Agilathon | 159 | 3 | 14h00 | Réunion plateforme SG |
| 24-sept | SG1 | 159 | 3 | 14h30 | Réunion jeudi Agilathon SG |
| 01-oct | Agilathon | Cirad 159 | 3 | 14h00 | |
| 08-oct | ID2 | ANNULEE ET REMPLACEE PAR MATINEE DU VENDREDI 09/10 EXCEPTIONNELLEMENT | |||
| 15-oct | SG2 | cirad 159 | 3 | 14h30 | |
| 22-oct | Agilathon | 159 | 3 | 14h00 | |
| 29-oct | Agilathon | 159 | 3 | 14h00 | |
| 05-nov | ID3 | 159 | 3 | 14h00 | |
| 12-nov | Agilathon | 159 | 3 | 14h00 | |
| 19-nov | Agilathon | 15 | 6 | 14h00 | Permutation de dates de reunion car trop d'absents (IRRI) pour SG3 le 19 |
| 26-nov | SG3 | 159 | 3 | 14h00 | |
| 03-déc | ID4 | 159 | 3 | 14h00 | |
| 10-déc | Agilathon | 159 | 3 | 14h00 | |
| 17-déc | SG4 | 159 | 3 | 14h00 | |
| 24-déc | Agilathon | 14h00 | |||
| 31-déc | Congé | ||||
| 07-janv | ID5 | 159 | 3 | 14h00 | |
| 14-janv | Agilathon | 159 | 3 | 14h00 | PAG meeting |
| 21-janv | SG5 | 159 | 3 | 14h00 | |
| 28-janv | Agilathon | 111 | 2 | 14h00 | |
| 04-févr | ID6 | 159 | 3 | 14h00 | |
| 11-févr | Genome Hub | 159 | 3 | 14h00 | A la place d'un agilathon |
| 18-févr | SG6 | 159 | 3 | 14h00 | Annulée |
| 25-févr | Agilathon | 159 | 3 | 14h00 | |
| 03-mars | Agilathon | 159 | 3 | 14h00 | |
| 10-mars | ID7 | 14h00 | |||
| 17-mars | Agilathon | 14h00 | |||
| 24-mars | SG7 | 159 | 14h00 | ||
| 31-mars | Agilathon | 15 | 6 | 14h00 | |
| 07-avr | 14h30 | Annulée au profit d'un groupe HUB | |||
| 14-avr | 159 | - | Annulée | ||
| 21-avr | Agilathon | 14h00 | |||
| 28-avr | ID9 | 14h00 | |||
| 05-mai | Férié & congé | ||||
| 12-mai | 14h30 | Annulée pour workshop ontologies | |||
| 19-mai | Agilathon | 14h00 | |||
| 26-mai | SG9 | 159 | 14h30 | ||
| 02-juin | Agilathon | 159 | 14h00 | ||
| 09-juin | Agilathon | 159 | 14h30 | ||
| 16-juin | Agilathon | 14h00 | |||
| 23-juin | SG10 | 14h30 | |||
| 30-juin | Agilathon | 14h00 | |||
| 07-juil | Agilathon | 14h00 | |||
| 14-juil | Férié & congé | ||||
| 21-juil | Agilathon | 14h00 | |||
Agilathon during holidays
14h30 : due to time difference with Colombia (summer time change)
Friday User Workshops*
Planning
| Date | Type | Room | Build | Participant | Title | Referent | Comment | |
|---|---|---|---|---|---|---|---|---|
| 04-sept | ANNULE | |||||||
| 11-sept | RNA-Seq1 | 111 | 2 | 14:00 |
ARCtik Redmine Project members http://gohelle.cirad.fr/redmine/issues/696 |
Atelier RNA-Seq | GSa / MS | Stéphanie / Gautier car Marilyne en formation R et Gautier sur article ARCAD SP4 |
| 18-sept | GBSpipe1 | 15 | 6 | 14:00 | groupe-gbs@cirad.fr | Atelier GBSpipelinethon | MS / Gsa | Marilyne / Stéphanie car Gautie sur ARCAD SP4 |
| 25-sept | Re-Seq1 | 159 | 3 | 14:00 | Atelier Re-Seq | Futur chercheur SEG / GD | Stéphanie / Gaetan car en attente du nouveau chercheur | |
| 02-oct | RNA-Seq2 | 31 | 3 | 14:00 | ||||
| 09-oct | GBSpipe2 | 159 | 3 | 14:00 | ||||
| 16-oct | Re-Seq2 | 159 | 3 | 14:00 | ||||
| 23-oct | Congé | |||||||
| 30-oct | ||||||||
| 06-nov | RNA-Seq3 | 159 | 3 | 14:00 | ||||
| 13-nov | GBSpipe3 | 159 | 3 | 14:00 | ||||
| 20-nov | Re-Seq3 | 159 | 3 | 14:00 | ||||
| 27-nov | RNA-Seq4 | 159 | 3 | 14:00 | ||||
| 04-déc | GBSpipe4 | 159 | 3 | 14:00 | ||||
| 11-déc | Re-Seq4 | 31 | 3 | 14:00 | ||||
| 18-déc | ANNULE (THESE) | |||||||
| 25-déc | Férié & congé |
|||||||
| 01-janv | ||||||||
| 08-janv | RNA-Seq5 | 159 | 3 | 14:00 | ||||
| 15-janv | ANNULE (PAG) | |||||||
| 22-janv | GBSpipe5 | 159 | 3 | 14:00 | ||||
| 29-janv | Re-Seq5 | 159 | 3 | 14:00 | ||||
| 05-févr | RNA-Seq6 | 159 | 3 | 14:00 | ||||
| 12-févr | GBSpipe6 | 159 | 3 | 14:00 | ||||
| 19-févr | Re-Seq6 | 159 | 3 | 14:00 | ||||
| 26-févr | Congé | |||||||
| 04-mars | ||||||||
| 11-mars | RNA-Seq7 | 14:00 | ||||||
| 18-mars | GBSpipe7 | 14:00 | ||||||
| 25-mars | Re-Seq7 | 14:00 | ||||||
| 01-avr | RNA-Seq8 | 14:00 | ||||||
| 08-avr | GBSpipe8 | 14:00 | ||||||
| 15-avr | Re-Seq8 | 14:00 | ||||||
| 22-avr | Congé | |||||||
| 29-avr | ||||||||
| 06-mai | RNA-Seq9 | 14:00 | ||||||
| 13-mai | GBSpipe9 | 14:00 | ||||||
| 20-mai | Re-Seq9 | 14:00 | ||||||
| 27-mai | RNA-Seq10 | 14:00 | ||||||
| 03-juin | GBSpipe10 | 14:00 | ||||||
| 10-juin | Re-Seq10 | 14:00 | ||||||
| 17-juin | RNA-Seq11 | 14:00 | ||||||
| 24-juin | GBSpipe11 | 14:00 | ||||||
| 01-juil | Re-Seq11 | 14:00 | ||||||
* These friday working groups are managed by the AGAP platform but are open to South Green platform members. Each group is managed by a chair and co-chair who facilitate workshops. These are meetings of feedback, sharing expertise (eg sharing procedures) and collaboration and may produce public source code.
The idea is to define common objectives and priorities and allocate tasks among subgroups (i.e. pairs) that are created during each session. To take place a minimum pair is necessary (ie, a biologist and bioinformatician).
A minimum number of computers required (ie at least one by sub-group) and it is also desirable to have an affinity for Linux command line, even if it can include non-command line software (eg Galaxy, Cytoscape).
